EHD Protein Family
   HOME

TheInfoList



OR:

The EHD protein family is a relatively small group of
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s which have been shown to play a role in several physiological functions, the most notable being the regulation of endocytotic vesicles. This family is recognized by its highly conserved EH (
Eps15 Epidermal growth factor receptor substrate 15 is a protein that in humans is encoded by the ''EPS15'' gene. Function This gene encodes a protein that is part of the EGFR pathway. The protein is present at clathrin-coated pits and is involved i ...
homology) domain, a structural motif that has been shown to facilitate specificity and interaction between protein and
ligand In coordination chemistry, a ligand is an ion or molecule (functional group) that binds to a central metal atom to form a coordination complex. The bonding with the metal generally involves formal donation of one or more of the ligand's electr ...
. The four mammalian EHD proteins that have been classified are: EHD1,
EHD2 EH-domain containing 2, also known as EHD2, is a human gene In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." meaning ''generation'' or ''birth'' or ''gender'') ...
, EHD3, and EHD4.


History

During the late 20th century, several advances were made regarding the identification of proteins involved in endocytotic recycling and other mechanisms of intracellular trafficking. This period of research led to the discovery of over 60 proteins which collectively make up the Rab family. Rab proteins have been found to play a major role in endocytotic recycling via
SNARE SNARE proteins – " SNAP REceptor" – are a large protein family consisting of at least 24 members in yeasts, more than 60 members in mammalian cells, and some numbers in plants. The primary role of SNARE proteins is to mediate vesicle fu ...
-based vesicle fusion and transport. When bound to GTP, Rab proteins have a large affinity for their respective effectors which then work to carry out a specific function. Some years later after the identification of the Rab family, the EHD family was discovered and was found to be associated with the same effectors that interact with the Rab proteins. This mutual interaction insinuates that the EHD proteins must somehow be cooperatively involved in the endocytotic recycling pathway. Some novel research even suggests that the EHD family has the ability to function in the place of Rab proteins when Rab concentrations drop.


Protein structure

While only the complete structure of EHD2 is known, all four of the EHD proteins have similar arrangements. Every EHD protein consists of approximately 534-543
amino acids Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although hundreds of amino acids exist in nature, by far the most important are the alpha-amino acids, which comprise proteins. Only 22 alpha am ...
. These amino acids assemble to form a unique secondary structure containing two helical regions, an ATP binding domain, a small linker region, and a C-terminus EH domain (see Figure 1).


EH domain

The EH domain is responsible for promoting specificity of interaction between the EHD protein and its associated effector. Current research suggests that the EH domain interacts with the NPF motif, a basic region classified by its arginine (N), proline (P), and phenylalanine (F) constituents. There have been several questions regarding the interaction between these two domains as they are both basic in nature and should, logically speaking, repel one another. The domains, however, are able to interact due to the flanking acidic amino acids (glutamate or aspartate) that surround either side of the NPF motif. These acidic amino acids create salt bridges with the lysine residues that lie within the EH domain and ultimately promote EHD functionality. Rabenosyn-5, Rab11-FIP2 and Syndapin II are examples of interaction partners that all contain multiple NPF motifs within their individual architectures.


ATP-binding domain

The ATP binding domain shows impressive structural and functional similarity to the
Dynamin Dynamin is a GTPase responsible for endocytosis in the eukaryotic cell. Dynamin is part of the "dynamin superfamily", which includes classical dynamins, dynamin-like proteins, Mx proteins, OPA1, mitofusins, and GBPs. Members of the dynamin fa ...
GTP binding domain which is known to facilitate
clathrin Clathrin is a protein that plays a major role in the formation of coated vesicles. Clathrin was first isolated and named by Barbara Pearse in 1976. It forms a triskelion shape composed of three clathrin heavy chains and three light chains. Whe ...
-coated vesicle budding. Given this resemblance, several researchers tend to consider the EHD protein family a sub-group that falls within the Dynamin protein
superfamily SUPERFAMILY is a database and search platform of structural and functional annotation for all proteins and genomes. It classifies amino acid sequences into known structural domains, especially into SCOP superfamilies. Domains are functional, str ...
. When ATP binds to this domain, EHD dimerization occurs, activating a cascade of reactions that results in the oligomerization of EHD and budding of the cell membrane to form a vesicle.


Helical regions

The two helical domains act as lipid binding interfaces so that the EHD protein can interact with the cell membrane. These regions are rotated 50° in relation to the ATP binding domain. This angulation is what facilitates the interaction of EHD with the lipid bilayer during endocytotic tubulation and vesiculation.


Transportation pathways

EHD proteins can recycle antigens, receptors, and other cellular materials through two mechanisms of recycling – slow and fast. Fast recycling is a direct pathway from early endosome to the cell membrane without an intermediate organelle present. Contrastingly, slow recycling requires cellular components to travel from early endosome to an endocytotic recycling compartment (ERC) before heading back towards the cell membrane. Other mechanisms of vesicular transport include retrograde transport, the movement of vesicles to the golgi apparatus, or lysosomal transport which results in the degradation of cellular material. The currently accepted model for the mechanism of EHD vesiculation and recycling is as follows (see Figure 2): # Cytoplasmic EHD binds ATP at the ATP binding domain which leads to dimerization of the protein # Membrane binding sites are formed and EHD associates with available tubular membranes # ATP is hydrolyzed which leads to the destabilization of the membrane # Vesicles are excised with cellular material trapped inside its walls


Family members


EHD1

The EHD1 protein is thought to carry out vesicular transportation from the early endosome to the ERC, which has been linked to
dynein Dyneins are a family of cytoskeletal motor proteins that move along microtubules in cells. They convert the chemical energy stored in ATP to mechanical work. Dynein transports various cellular cargos, provides forces and displacements importa ...
motor proteins, as well as transportation from the ERC to the cell membrane. It has also been implicated in specialized modes of transport dependent upon the cellular material involved. Current research suggests that EHD1 plays a role in carrying the
transferrin receptor Transferrin receptor (TfR) is a carrier protein for transferrin. It is needed for the import of iron into the cell and is regulated in response to intracellular iron concentration. It imports iron by internalizing the transferrin-iron complex thro ...
, the
LDL receptor The low-density lipoprotein receptor (LDL-R) is a mosaic protein of 839 amino acids (after removal of 21-amino acid signal peptide) that mediates the endocytosis of cholesterol-rich low-density lipoprotein (LDL). It is a cell-surface receptor ...
, and other receptors that are associated with clathrin-independent internalization.


EHD2

No consensus has been reached regarding the role of EHD2.


EHD3

Studies regarding the physiological functions of EHD3 are still being debated today. Currently, EHD3 is thought to interact with EHD1 to carry out transportation from the early endosome to the ERC. Evidence for this is implied as present-day research has only observed the consequences of the depletion of EHD3 concentration levels which renders transport from early endosome to ERC defective. Other research suggests that the EHD3 protein is involved in the retrograde pathway. A common receptor that is recycled via EHD3 is the
dopamine receptor Dopamine receptors are a class of G protein-coupled receptors that are prominent in the vertebrate central nervous system (CNS). Dopamine receptors activate different effectors through not only G-protein coupling, but also signaling through diffe ...
.


EHD4

EHD4 is implicated in vesicular transport from early endosome to ERC as well as in the lysosomal degradation pathway. Recent studies have shown that the EHD4 protein may only function within specific tissues. Nerve growth receptors such as
TrkA Tropomyosin receptor kinase A (TrkA), also known as high affinity nerve growth factor receptor, neurotrophic tyrosine kinase receptor type 1, or TRK1-transforming tyrosine kinase protein is a protein that in humans is encoded by the ''NTRK1'' gen ...
/
TrkB Tropomyosin receptor kinase B (TrkB), also known as tyrosine receptor kinase B, or BDNF/NT-3 growth factors receptor or neurotrophic tyrosine kinase, receptor, type 2 is a protein that in humans is encoded by the ''NTRK2'' gene. TrkB is a recepto ...
are commonly transported via EDH4.


Other EHD receptors

*
Ankyrin Ankyrins are a family of proteins that mediate the attachment of integral membrane proteins to the spectrin-actin based membrane cytoskeleton. Ankyrins have binding sites for the beta subunit of spectrin and at least 12 families of integral mem ...
* TCR-CD3 * Yolk receptors *
GLUT4 Glucose transporter type 4 (GLUT4), also known as solute carrier family 2, facilitated glucose transporter member 4, is a protein encoded, in humans, by the ''SLC2A4'' gene. GLUT4 is the insulin-regulated glucose transporter found primarily in adi ...
glucose transporter * HIV Nef *
Glutamate receptors Glutamate receptors are synaptic and non synaptic receptors located primarily on the membranes of neuronal and glial cells. Glutamate (the conjugate base of glutamic acid) is abundant in the human body, but particularly in the nervous system an ...
* NGF-R


References

EH-domain-containing proteins Protein families {{Protein-stub __FORCETOC__